Supervising:

Xavier Dallaire (Ph.D. student)

Océane Perrot (Ph.D. student)

Co-supervising:

Marianne Falardeau (Postdoctoral fellow)

Recent Theses and Dissertations

Xavier Dallaire (Master - 2020)
Population genomic of Arctic char (Salvelinus alpinus) in Nunavik

Scientific Communications

Arachchilage, I.P.M., Harris, L.N., Moore, J.-S., Tallman, R.F., Fisk, A.T., Gillis, D.M., Muthukumarana, S., 2022. Estimating survival probabilities of Cambridge Bay arctic char using acoustic telemetry data and bayesian multi-state capture-recapture models. Canadian Journal of Fisheries and Aquatic Sciences(published online 2022-08-03). DOI: 10.1139/cjfas-2021-0262.

Falardeau, M., Bennett, E.M., Brent, E., Fisk, A.T., Mundy, C.J., Choy, E.S., Ahmed, M.M.M., Harris, L.N., Moore, J.-S., 2022. Biophysical indicators and indigenous and local knowledge reveal climatic and ecological shifts with implications for Arctic Char fisheries. Global Environmental Change, 74, 102469. DOI: 10.1016/j.gloenvcha.2022.102469.

Galappaththi, E.K., Falardeau, M., Harris, L.N., Rocha, J.C., Moore, J.-S., Berkes, F., 2022. Resilience-based steps for adaptive co-management of arctic small-scale fisheries. Environmental Research Letters, 17, 083004. DOI: 10.1088/1748-9326/ac7b37.

Gilbert, M.J.H., Middleton , E.K., Kanayok, K., Harris, L.N., Moore, J.-S., Farrell, A.P., Speers-Roesch, B., 2022. Rapid cardiac thermal acclimation in wild anadromous Arctic char (Salvelinus alpinus). Journal of Experimental Biology, 225(17), jeb244055. DOI: 10.1242/jeb.244055.

Harris, L.N., Yurkowski, D.J., Malley, B.K., Jones, S.F., Else, B.G.T., Tallman, R.F., Fisk, A.T., Moore, J.-S., 2022. Acoustic telemetry reveals the complex nature of mixed-stock fishing in Canada’s largest Arctic Char commercial fishery. North American Journal of Fisheries Management(published online 2022-09-16). DOI: 10.1002/nafm.10816.

Matley, J.K., Klinard, N.V., Barbosa Martins, A.P., Aarestrup, K., Aspillaga, E., Cooke, S.J., Cowley, P.D., Heupel, M.R., Lowe, C.G., Lowerre-Barbieri, S.K., Mitamura, H., Moore, J.-S., Simpfendorfer, C.A., Stokesbury, M.J.W., Taylor, M.D., Thorstad, E.B., Vandergoot, C.S., Fisk, A.T., 2022. Global trends in aquatic animal tracking with acoustic telemetry. Trends in Ecology and Evolution, 37(1): 79-94. DOI: 10.1016/j.tree.2021.09.001.

Caza-Allard, I., Mazerolle, M.J., Harris, L.N., Malley, B.K., Tallman, R.F., Fisk, A.T., Moore, J.-S., 2021. Annual survival probabilities of anadromous Arctic Char remain high and stable despite interannual differences in sea ice melt date. Arctic Science, 7(2): 575-584. DOI: 10.1139/as-2020-0029.

Dallaire, X., Normandeau, É., Mainguy, J., Tremblay, J.-É., Bernatchez, L., Moore, J.-S., 2021. Genomic data support management of anadromous Arctic Char fisheries in Nunavik by highlighting neutral and putatively adaptive genetic variation. Evolutionary Applications, 14(7): 1880-1897. DOI: 10.1111/eva.13248.

Rougemont, Q., Moore, J.-S., Leroy, T., Normandeau, É., Rondeau, E.B., Withler, R.E., Van Doornik, D.M., Crane, P.A., Naish, K.A., Garza, J., Beacham, T.D., Koop, B.F., Bernatchez, L., 2021. Correction: Demographic history shaped geographical patterns of deleterious mutation load in a broadly distributed Pacific Salmon. PLoS Genetics, 17(2), e1009397. DOI: 10.1371/journal.pgen.1009397.

Beacham, T.D., Wallace, C., Jonsen, K., McIntosh, B., Candy, J.R., Rondeau, E.B., Moore, J.-S., Bernatchez, L., Withler, R.E., 2020. Accurate estimation of conservation unit contribution to coho salmon mixed-stock fisheries in British Columbia, Canada, using direct DNA sequencing for single nucleotide polymorphisms. Canadian Journal of Fisheries and Aquatic Sciences, 77(8): 1302-1315. DOI: 10.1139/cjfas-2019-0339.

Gilbert, M.J.H., Harris, L.N., Malley, B.K., Schimnowski, A., Moore, J.-S., Farrell, A.P., 2020. The thermal limits of cardiorespiratory performance in anadromous Arctic char (Salvelinus alpinus): a field-based investigation using a remote mobile laboratory. Conservation Physiology, 8(1), coaa036. DOI: 10.1093/conphys/coaa036.

Harris, L.N., Malley, B.K., McDermid, C.G., Gallagher, C., Moore, J.-S., Tallman, R.F., 2020. Weir enumerations and capture-mark-recapture estimates of population size for arctic char (Salvelinus alpinus) from the Halokvik River, Nunavut. Rapport préparé pour Fisheries and Oceans Canada. Rapport de recherche 3199.

Harris, L.N., Malley, B.K., Moore, J.-S., Tallman, R.F., 2020. A dressed weight to round weight conversion factor for commercially harvested arctic char (Salvelinus alpinus) from the Halokvik River, Nunavut. Rapport préparé pour Fisheries and Oceans Canada. Rapport de recherche 1309.

Harris, L.N., Swanson, H.K., Gilbert, M.J.H., Malley, B.K., Fisk, A.T., Moore, J.-S., 2020. Anadromy and marine habitat use of Lake trout (Salvelinus namaycush) from the central Canadian Arctic. Journal of Fish Biology, 96(6): 1489-1494. DOI: 10.1111/jfb.14305.

Harris, L.N., Yurkowski, D.J., Gilbert, M.J.H., Else, B.B.G.T., Duke, P.J., Ahmed, M., Tallman, R.F., Fisk, A.T., Moore, J.-S., 2020. Depth and temperature preference of anadromous Arctic Char, Salvelinus alpinus, in the Kitikmeot Sea: a shallow and low salinity area of the Canadian Arctic. Marine Ecology Progress Series, 634: 175-197. DOI: 10.3354/meps13195.

Rougemont, Q., Moore, J.-S., Leroy, T., Normandeau, É., Rondeau, E.B., Withler, R.E., Van Doornik, D.M., Crane, P.A., Naish, K.A., Garza, J., Beacham, T.D., Koop, B.F., Bernatchez, L., 2020. Demographic history shaped geographical patterns of deleterious mutation load in a broadly distributed Pacific Salmon. PLoS Genetics, 16(8), e1008348. DOI: 10.1371/journal.pgen.1008348 pmid:32845885.

Beacham, T.D., Wallace, C., Jonsen, K., McIntosh, B., Candy, J.R., Willis, D., Lynch, C.F., Moore, J.-S., Bernatchez, L., Withler, R.E., 2019. Comparison of coded‐wire tagging with parentage‐based tagging and genetic stock identification in a large‐scale coho salmon fisheries application in British Columbia, Canada. Evolutionary Applications, 12(2): 230-254. DOI: 10.1111/eva.12711.

López, M.E., Benestan, L., Moore, J.-S., Perrier, C., Gilbey, J., Di Genova, A., Maass, A., Diaz, D., Lhorente, J.-P., Correa, K., Neira, R., Bernatchez, L., Yáñez, J.M., 2019. Comparing genomic signatures of domestication in two Atlantic salmon (Salmo salar L.) populations with different geographical origins. Evolutionary Applications, 12(1 - Special Issue: Genomics of Domestication): 137-156. DOI: 10.1111/eva.12689.

Cayuela, H., Rougemont, Q., Prunier, J.G., Moore, J.-S., Colbert, J., Besnard, A., Bernatchez, L., 2018. Demographic and genetic approaches to study dispersal in wild animal populations: A methodological review. Molecular Ecology, 27(20): 3976-4010. DOI: 10.1111/mec.14848.

Caza-Allard, I., Moore, J.-S., Mazerolle, M.J., 2018. Estimation de la probabilité de survie de l’omble chevalier à l’aide de la télémétrie acoustique dans un contexte de pêche et de changements climatiques. Journée de la recherche en biologie des étudiants du baccalauréat, Université Laval. Québec, Québec, Canada.

Gaumond, E., Perreault-Payette, A., Laporte, M., Moore, J.-S., 2018. Différenciation morphologique entre des populations d’ombles chevaliers anadromes frayant dans des rivières de différentes longueurs. Journée de la recherche en biologie des étudiants du baccalauréat, Université Laval. Québec, Québec, Canada.

Moore, J.-S., Benestan, L., 2018. Let's talk about sex: A rigorous statistical framework to assign the sex of individuals from reduced-representation sequencing data. Molecular Ecology Resources, 18(2): 191-193. DOI: 10.1111/1755-0998.12761.

Moore, J.-S., Chapman, J.M., Mazerolle, M.J., Harris, L.N., Taylor, E.B., 2018. Premature alarm on the impacts of climate change on Arctic Char in Lake Hazen. Nature Communications, 9, 3985. DOI: 10.1038/s41467-018-06479-5.

Segherloo, I.H., Normandeau, E., Benestan, L., Rougeux, C., Coté, G., Moore, J.-S., Ghaedrahmati, N.A., Abdoli, A., Bernatchez, L., 2018. Genetic and morphological support for possible sympatric origin of fish from subterranean habitats. Scientific Reports, 8, 2909. DOI: 10.1038/s41598-018-20666-w.

Thorpe, N., Moore, J.-S., Ekaluktutiak Hunters, , Trappers Organization, , 2018. Learning together: Science and Inuit Qaujimajatuqangit join forces to better understand Iqalukpiit/Arctic Char in the Kitikmeot region. Pages 84-91 dans Polar Knowledge: Aqhaliat 2018 Report. Polar Knowledge Canada. DOI: 10.35298/pkc.2018.11.

Benestan, L., Moore, J.-S., Sutherland, B.J.G., Le Luyer, J., Maaroufi, H., Rougeux, C., Normandeau, E., Rycroft, N., Atema, J., Harris, L.N., Tallman, R.F., Greenwood, S.J., Clark, F.K., Bernatchez, L., 2017. Sex matters in massive parallel sequencing: Evidence for biases in genetic parameter estimation and investigation of sex determination systems. Molecular Ecology, 26(24): 6767-6783. DOI: 10.1111/mec.14217.

Moore, J.-S., Harris, L.N., Le Luyer, J., Sutherland, B.J.G., Rougemont, Q., Tallman, R.F., Fisk, A.T., Bernatchez, L., Greenwood, S.J., 2017. Genomics and telemetry suggest a role for migration harshness in determining overwintering habitat choice, but not gene flow, in anadromous Arctic Char. Molecular Ecology, 26(24): 6784-6800. DOI: 10.1111/mec.14393.

Moore, J.-S., Harris, L.N., Kessel, S.T., Bernatchez, L., Tallman, R.F., Fisk, A.T., 2016. Preference for near-shore and estuarine habitats in anadromous Arctic char (Salvelinus alpinus) from the Canadian high Arctic (Victoria Island, NU) revealed by acoustic telemetry. Canadian Journal of Fisheries and Aquatic Sciences, 73(9): 1434-1445. DOI: 10.1139/cjfas-2015-0436.